FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005408329

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005408329
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14904924
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGG315210.2114804476695084No Hit
GTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGAC263710.17692810778505144No Hit
CTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC153580.10303977396999811No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)