FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005408380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005408380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38031317
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT1248090.3281742780561609No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT417850.10986997899652017No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)