FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005408390

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005408390
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12846723
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT246670.19201005579399508No Hit
CTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACG156140.12154072287539788No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG152160.11844265654361817No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)