FastQCFastQC Report
Thu 12 May 2022
EGAF00005408455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005408455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43239808
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT941026621.762968975255394No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA733254416.957855132011687No Hit
GGGGCGTGTTGCGTGCGGTGTGGTGGTGGGGGAGGAGGAAGGCGGGTCCG638810.14773654869142805No Hit
GGGAGGAGGAAGGCGGGTCCGGAAGGGGAAGGGTGCCGGCGGGGAGAGAG629730.14563663187403605No Hit
GGGGGAGCCGCGGGGATCGCCGAGGGCCGGTCGGCCGCCCCGGGTGCCGC606450.14025270417481964No Hit
GGAGGAGGAAGGCGGGTCCGGAAGGGGAAGGGTGCCGGCGGGGAGAGAGG581970.13459125442925185No Hit
GGGGGAGAAGGGTCGGGGCGGCAGGGGCCGGCGGCGGCCGCCGCGGGGCC567220.1311800459428497No Hit
GGCGTGTTGCGTGCGGTGTGGTGGTGGGGGAGGAGGAAGGCGGGTCCGGA559970.12950335024614357No Hit
GGAAGGCGGGTCCGGAAGGGGAAGGGTGCCGGCGGGGAGAGAGGGTCGGG521360.12057407840478848No Hit
GGGGGACCGGCCGCGACTGCGGCGGCGGTGGTGGGGGGAGCCGCGGGGAT455250.10528492633454802No Hit
CCCGGGTGCCCGGGCCCCCCTCGCGGGGGACCGTGCCCCCGCCGCCGGGG453140.10479695006971354No Hit
GGAGAAGGGTCGGGGCGGCAGGGGCCGGCGGCGGCCGCCGCGGGGCCCCG447170.1034162778891155No Hit
GGGGGCGTGTTGCGTGCGGTGTGGTGGTGGGGGAGGAGGAAGGCGGGTCC444820.10287279721501078No Hit
GCCGGCTCGGGCCGAGTTCCCGTGGCCGCCGCCTGCGGTCCGGGTTCCTC444340.10276178839647022No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)