FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005409446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005409446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64547579
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAGCGG1742466526.99507134109553No Hit
GCCTTTAT1680351326.0327548458479No Hit
AAAGCATA1537318123.816820457355963No Hit
CTGCAGCC1494622023.155353355700605No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)