FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005409611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005409611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52907102
Sequences flagged as poor quality0
Sequence length8
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATGCTCT1939736636.66306651987856No Hit
CCGTTGAA1613428730.495503231305314No Hit
ATCCAAGG1030362119.474929849682564No Hit
GGAAGCTC707182813.36650039913356No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)