FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005409740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005409740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59569314
Sequences flagged as poor quality0
Sequence length8
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCACAA1976436633.17877053276121No Hit
TGCGTACC1418066723.80532198171696No Hit
CCATGTGT1386910623.282299339555934No Hit
AAGACGTG1175517519.733608145965892No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)