FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005409797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005409797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76950586
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTTACAT2098128827.265923614928678No Hit
AGCCTATG2017529826.218511188465804No Hit
TAGGGTGC1978678525.713624844910214No Hit
CTAACGCA1600721520.801940351695308No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)