FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005409803

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005409803
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71915122
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTTACAT1958639327.235430400855055No Hit
AGCCTATG1871543926.024344365292183No Hit
TAGGGTGC1862165325.893932294239868No Hit
CTAACGCA1499163720.846292939612894No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)