FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005409926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005409926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66157865
Sequences flagged as poor quality0
Sequence length8
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGTTTC2200205933.25690603830701No Hit
GCACCAGT2139364232.337261790416No Hit
TAGTACCA1647059324.895895597598262No Hit
CGCAGGAG62915719.509936573678731No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)