FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005409932

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005409932
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68700983
Sequences flagged as poor quality0
Sequence length8
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGACAAT2665839038.803505911989646No Hit
GAATACTG1655327524.094669795336117No Hit
ATTCGTGC1523871222.181213913634977No Hit
CGCGTGCA1025060614.920610379039264No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)