Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005409980 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 63308885 |
Sequences flagged as poor quality | 0 |
Sequence length | 16 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Can't analyse adapters as read length is too short
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCCTGC | 80 | 2.9507646E-8 | 10.013044 | 1 |
GGAACCC | 10745 | 0.0 | 9.999065 | 1 |
CGATCCT | 940 | 0.0 | 9.998398 | 5 |
CGGAGAC | 760 | 0.0 | 9.998397 | 5 |
CTCTACG | 19805 | 0.0 | 9.995349 | 1 |
TTTGGCC | 13325 | 0.0 | 9.994258 | 1 |
TTGACGA | 15335 | 0.0 | 9.993455 | 1 |
TTACCCG | 17325 | 0.0 | 9.989925 | 1 |
TACCGCT | 5170 | 0.0 | 9.988878 | 2 |
GACCGAC | 13315 | 0.0 | 9.986724 | 1 |
TTACCGC | 20180 | 0.0 | 9.985754 | 1 |
AGCCTCT | 15250 | 0.0 | 9.983497 | 1 |
CCTTAAT | 17190 | 0.0 | 9.981007 | 1 |
GGAACTT | 10895 | 0.0 | 9.980877 | 1 |
ATCCTGC | 14510 | 0.0 | 9.978539 | 1 |
GAAATGA | 12205 | 0.0 | 9.976125 | 1 |
ACTACGA | 13410 | 0.0 | 9.97571 | 1 |
GCCTACT | 13295 | 0.0 | 9.975387 | 1 |
GATGGCC | 13195 | 0.0 | 9.975101 | 1 |
GGTTACC | 4125 | 0.0 | 9.974435 | 7 |