FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005409982

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005409982
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63162927
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACGGAT1776808428.130558294108187No Hit
GTCGACTC1628449225.78172477662411No Hit
CCTTTAGA1412087622.356272374774523No Hit
TAGACTCG1368085021.65962004895688No Hit
GTCGACTA1015690.16080477081120703No Hit
GTCGTCTC854360.13526288925780783No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)