FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124758846
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTACCTG3268033926.194807060014003No Hit
TGCTGTAA3118256224.994269344235516No Hit
AAAGTGCT3017316324.185189241009812No Hit
CTGCAAGC2911551923.337438533216314No Hit
GCTACCTA1369850.10979982934436569No Hit
TGCTGAAA1326780.10634756913349457No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)