FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410089

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410089
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136162003
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACCCGTT3938493128.92505260810536No Hit
GGAGGAGG3488417425.619609899540034No Hit
TTGTTTCC3261522723.95325148088487No Hit
CCTAACAA2686753919.73203860698201No Hit
AACCCGGT3461120.25419132531415534No Hit
AACCCGTA2601600.19106651949002249No Hit
TTGTTTCA2200930.1616405422590618No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)