FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132280344
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGCTCG3931104629.717979868573668No Hit
TGGTAAAC3197254524.17029169503823No Hit
CTCCTCTA2930277122.152022072153063No Hit
GAAAGGGT2901985521.938146003007066No Hit
GTCCTCTA8449460.6387540086832553No Hit
TGGTAATC1969760.14890798892993504No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)