FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113880269
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAGTAGA3109750827.307195770673847No Hit
CAGTACTG2774426024.362657590842186No Hit
TTCCCGAC2771368424.335808339195264No Hit
AGTAGTCT2587695222.722945974073877No Hit
CAGTACTA1170550.10278777968113159No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)