FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113257743
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGACAT3487219330.790118252665515No Hit
CGATCACC2743817324.226310955181226No Hit
GATCTTGA2637533823.28788946465232No Hit
TTCAGGTG2292629820.242587740778127No Hit
CGATCACA1996470.17627668953282954No Hit
ACGGACCT1654940.14612157687090763No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)