FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123854162
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGGCGTC3447770027.83733662498964No Hit
GGTTTACT3314999326.765344389476393No Hit
AACCGTAA2852395523.03027572056884No Hit
CTAAACGG2633139921.260003357820143No Hit
CTAAACGA1467520.11848774205908397No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)