FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410296

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410296
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100831663
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCGAT2826350028.030381686752502No Hit
GAAGGCTG2663137926.411722476500266No Hit
TGGATTGC2244338022.258266235279685No Hit
CCCTAACA2204276921.860959488489247No Hit
GGGATTGC1652560.16389296286822128No Hit
GAAGGCTA1143850.11344154861355406No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)