FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110649523
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAGTCGC3362883230.39220693251429No Hit
GTGTCGCT2572025423.244794286189556No Hit
CCCAATAG2522848522.80035585874148No Hit
TATCGATA2401565621.70425623976707No Hit
CCCACTAG4952400.4475753591816207No Hit
CCCCATAG1849100.16711323735213934No Hit
GATCGATA1152880.10419204428020896No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)