FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410305

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410305
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119791963
Sequences flagged as poor quality0
Sequence length8
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACGGTGC3510847329.30787017823558No Hit
GCGATGTG3166121326.430164601276296No Hit
TTTCCACT2603551721.733943035894654No Hit
AGATACAA2531270821.13055614590772No Hit
GCGAGGTG2204030.18398813616569584No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)