FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410314

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410314
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105672638
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGTACAC2988565828.281358888759833No Hit
ATTGCGTG2600156424.605767862064727No Hit
CGACTTGA2480639523.474757013258248No Hit
TACAGACT2363647922.367643552155858No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)