FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410323

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410323
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112807892
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTACGT3115372627.61661923440605No Hit
AGGCGTCA3077346827.279534662344368No Hit
CTAGCGAG2635389423.361746711834666No Hit
TCTATATC2268543620.10979515511202No Hit
CTCGCGAG2602570.23070814939082454No Hit
CTAGCGAA1504180.13333996171118948No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)