FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147346022
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCGGCT3916988226.583603322524716No Hit
TCTGTTGG3814243725.88630251585618No Hit
GACTCAAA3695012625.077111345428786No Hit
AGAAACTC3076488320.879344133226752No Hit
TCTGTTGA2810960.190772710511316No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)