FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113405020
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCAAGC2901216225.582784606889536No Hit
GCTACCTG2865333225.266370042525455No Hit
AAAGTGCT2816376924.83467574892187No Hit
TGCTGTAA2603264722.95546264177723No Hit
GCTACCTA1452450.12807634088861322No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)