FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005410410

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005410410
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125775038
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGGACGT3246267525.810109474981836No Hit
GGAATGTC3133086324.910239343358416No Hit
CCTTGTAG3054006024.281495347272326No Hit
ATCCCACA2898272123.043301326611406No Hit
AGCCCACA3652640.2904105662047186No Hit
GGACTGTC2339570.18601226739442528No Hit
CCGTGTAG1679550.13353603598195693No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)