EGAF00005411322 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411322
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1107000
Sequences flagged as poor quality	0
Sequence length	91
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2598	0.23468834688346882	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1957	0.1767841011743451	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	1754	0.15844625112917796	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1403	0.12673893405600722	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1317	0.11897018970189702	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1269	0.1146341463414634	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	1244	0.11237579042457091	No Hit
CTTATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGT	1115	0.1007226738934056	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCGCA	20	0.0032230779	63.751865	2
TGGTATC	1095	0.0	53.17507	2
ATCGGGC	35	4.824069E-4	48.577236	8
GTGGTAT	1300	0.0	45.44979	1
GCGGTAT	80	1.1275915E-8	42.507	1
GCGTAAA	70	1.8965329E-7	42.507	1
CGTAAAA	70	1.898552E-7	42.50124	2
GTATCAA	4565	0.0	42.36733	1
GCAGCGT	110	1.1277734E-10	38.642727	1
CGTTGTG	55	9.55996E-5	38.637493	2
AGGCTGA	155	0.0	38.391685	7
TCGGGCA	45	0.0016620434	37.782295	9
GGTATCA	2245	0.0	37.300133	1
CGTCAGA	130	1.6370905E-11	35.96259	5
TATCAAC	5760	0.0	34.01575	2
ATCGTAA	25	0.0027897598	33.99946	84-85
CGGTATC	65	2.552855E-4	32.69326	2
CAACGCA	6360	0.0	31.07402	5
ATCAACG	6420	0.0	30.651207	3
TCGACTT	450	0.0	30.223104	2