EGAF00005411343 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411343
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1725863
Sequences flagged as poor quality	0
Sequence length	61
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	9441	0.5470306739295066	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCGTTA	30	3.492848E-5	45.83133	8
TGCTACG	40	3.940644E-6	41.250587	19
GCTACGC	40	3.940644E-6	41.250587	20
TGGTATC	2395	0.0	38.702473	2
GTGGTAT	2470	0.0	38.214268	1
CCCGAGT	30	0.0019257561	36.667187	48
TAGACCG	30	0.001926304	36.665066	4
GACCGCT	30	0.001926304	36.665066	6
TAGATCG	35	0.004101077	31.427197	14
GCGTACG	35	0.004101077	31.427197	12
ACCGTGT	55	3.4928897E-5	29.99869	29
ACTGGCG	130	0.0	29.614092	8
GTATCAA	10615	0.0	29.501944	1
TTAAACG	185	0.0	28.243645	22
TTCCGCG	40	0.007873663	27.500393	19
GGTATGC	50	7.032774E-4	27.500391	19
CGACTCG	40	0.007874776	27.499596	31
ACCGCTT	40	0.007875889	27.498798	7
CGTTCGA	50	7.0351566E-4	27.498798	10
CGTTACA	50	7.0351566E-4	27.498798	10