FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005411366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005411366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1874145
Sequences flagged as poor quality0
Sequence length91
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT28170.15030854069455674No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT25170.13430124136606292No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21100.11258467194373968No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)