EGAF00005411375 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411375
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	782641
Sequences flagged as poor quality	0
Sequence length	61
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	6705	0.8567146367236064	No Hit
GTACATTCCACAAGCATTGCCTTCTTATTTTACTTCTTTTAGCTGTTTAACTTTGTAAGAT	857	0.10950103559614179	No Hit
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCT	856	0.10937326309252901	No Hit
GTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCTGTTCAATCGT	850	0.1086066280708524	No Hit
CCTCATTACGATTCGCCTGCTTGCTTCTCCTGTTCAATCGTTTCTTTGGAAGGCAGTGGAT	819	0.10464568045885662	No Hit
GACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGA	810	0.10349572792634171	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGAG	30	0.0019252369	36.66671	24
AACTCGT	30	0.0019252369	36.66671	18
GCCGTTA	30	0.0019252369	36.66671	41
CTACGAC	50	1.8192422E-5	33.00004	3
GTGAGGT	85	7.585186E-10	32.35091	14
CCAACCG	70	1.6068589E-7	31.430614	43
GCTCCGA	70	1.6086597E-7	31.4266	29
GTACTAG	45	3.7788198E-4	30.57708	1
TGGTATC	1350	0.0	30.563402	2
TGAACGA	65	3.2055395E-6	29.613527	14
CAACCGA	75	2.9414514E-7	29.335243	44
GAGTGAG	95	2.4956535E-9	28.94555	12
GAGGTTA	95	2.4956535E-9	28.94555	16
GTGGTAT	1490	0.0	28.44284	1
GTATCAA	5280	0.0	28.301174	1
GCTAGTT	40	0.007861766	27.507063	2
ACCGAAA	120	3.6379788E-11	27.50179	46
ACGACGC	40	0.007869124	27.50179	55
CGCTGGT	70	5.7009984E-6	27.501787	48
AGTGTCA	70	5.7009984E-6	27.501787	55