FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005411377

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005411377
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences237803
Sequences flagged as poor quality0
Sequence length61
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41691.7531317939639115No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAAC3370.14171393968957496No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTT2800.11774451962338574No Hit
GTTTAGAAGATGACAGGGCTCTCGAAGTCTCACCTGTCTTTTGTTTCTTTACAGGTTTTTC2560.10765213222709553No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGA2450.10302645467046252No Hit
GTCTAACGCCTACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAGT2390.10050335782138997No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)