EGAF00005411384 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411384
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	876326
Sequences flagged as poor quality	0
Sequence length	91
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2854	0.3256778869963917	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2176	0.24830941909745916	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	1931	0.22035178689209267	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1436	0.16386595855880118	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	1329	0.15165589061604928	No Hit
GACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAA	1169	0.1333978450941773	No Hit
GGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGAT	900	0.10270150606053	No Hit
GGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT	887	0.1012180398618779	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGTCCG	20	3.0249177E-5	85.01838	1
CCAGTTG	45	4.4165245E-7	56.66598	3
GTGGTAT	1295	0.0	51.864494	1
TGGTATC	1365	0.0	49.81625	2
GTATCAA	5395	0.0	44.676014	1
TACTAGG	90	6.730261E-10	42.504337	7
TATCAAC	6385	0.0	38.139713	2
ACGTGCA	45	0.0016619975	37.78163	7
GGTATCA	2475	0.0	36.583668	1
CGACTTT	535	0.0	34.952847	3
ATACGTG	75	1.4828282E-5	34.001526	5
CAACGCA	7315	0.0	33.873703	5
CCTCCGG	240	0.0	33.649265	6
ATCAACG	7345	0.0	33.617702	3
GTCGACT	575	0.0	33.26806	1
GCGTCAG	230	0.0	33.260468	4
TCAACGC	7570	0.0	32.618492	4
TATACGT	80	2.3067674E-5	31.874617	4
CGTGCAA	55	0.0044452166	30.912247	8
TCGACTT	650	0.0	29.422724	2