FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005411424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005411424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5296
Sequences flagged as poor quality0
Sequence length91
%GC59

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACTAGCGCT611.1518126888217521No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGGTGGCGG360.6797583081570997No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGGTGGGGG360.6797583081570997No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGGGGGTGGCGG330.6231117824773414No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGGGGGGGG240.4531722054380665No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGT190.35876132930513593No Hit
GTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACTAGCGCTCA190.35876132930513593No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGCGTATGCCGG140.26435045317220546No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGGTTGGGG130.24546827794561932No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGG120.22658610271903326No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGGGGGTGGGGG120.22658610271903326No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGCGGGTGGCGG120.22658610271903326No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGGGGGGGGGGG110.20770392749244715No Hit
GAGATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACTA110.20770392749244715No Hit
GATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACTAGC110.20770392749244715No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGTTTGGGG110.20770392749244715No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGGCGT110.20770392749244715No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGCGTATGCCGT100.18882175226586104No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGGCGG100.18882175226586104No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGCGGGTGGCGG90.16993957703927492No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGGGGTTGGCGG90.16993957703927492No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGGTTGCGG90.16993957703927492No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGCGGATGGCGG90.16993957703927492No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGGGGGTTGGGG90.16993957703927492No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGCGTGTGGCGG80.1510574018126888No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGGGTGTGGCGG80.1510574018126888No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCAGCGGGGGTGGCGG80.1510574018126888No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGGTGGGCG80.1510574018126888No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGCGGGGGGCGG80.1510574018126888No Hit
GGAGATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACT80.1510574018126888No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGGGGTTGGGGG80.1510574018126888No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGTTGGGGG70.13217522658610273No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCAGGGGGGGGGGGGG70.13217522658610273No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGCGTATGGCGT70.13217522658610273No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGGGGGCGG70.13217522658610273No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCG60.11329305135951663No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCCTGGGGGGGGGCGG60.11329305135951663No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGGGGTTGGCGT60.11329305135951663No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCC60.11329305135951663No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGCGGATGGCGT60.11329305135951663No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATGGGGGGGTGGGG60.11329305135951663No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCGGGGATGGCGG60.11329305135951663No Hit
GTGTATAAGAGACAGTCTTATACACATCTCCGAGCCCACGAGACTAGCGC60.11329305135951663No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)