EGAF00005411432 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411432
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	802591
Sequences flagged as poor quality	0
Sequence length	91
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1335	0.16633627837840195	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1063	0.13244604038669758	No Hit
GACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAA	1005	0.12521944552081943	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	1001	0.12472105966800026	No Hit
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGC	986	0.12285211271992832	No Hit
CCTCATTACGATTCGCCTGCTTGCTTCTCCTGTTCAATCGTTTCTTTGGA	865	0.10777594067214809	No Hit
GTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCC	837	0.1042872397024138	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGACTC	30	2.2541935E-4	56.66987	9
GTGGTAT	770	0.0	43.606358	1
TCTAGCC	50	5.4506847E-5	42.499752	3
ACTCGGT	190	0.0	40.26543	1
AGTACCC	95	1.1441443E-9	40.26292	5
GTATCAA	3285	0.0	38.297443	1
GAATACG	45	0.0016622868	37.77991	1
TGGTATC	935	0.0	36.817966	2
GGTATCA	1540	0.0	36.154636	1
TATCAAC	3560	0.0	35.33687	2
CGTAGAC	85	8.69597E-7	34.999798	2
TCGGTGG	220	0.0	34.772526	3
ATAGCAC	75	1.4831885E-5	33.9998	4
GACGATC	165	0.0	33.486736	8
CTAAGGA	165	0.0	33.484653	3
ACAGGTA	90	1.3588342E-6	33.057423	1
AGTGTGC	90	1.3588342E-6	33.057423	8
CGGTGGT	235	0.0	32.553	4
GTAGACC	105	1.2373857E-7	32.38076	3
GGCTAAG	185	0.0	32.163975	1