EGAF00005411470 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411470
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	339611
Sequences flagged as poor quality	0
Sequence length	91
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2609	0.7682318888375229	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1960	0.5771308938756401	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	1494	0.4399150793113297	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1260	0.3710127174914829	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	985	0.2900377196262783	No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGGGG	847	0.24940299342483016	No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGGGG	781	0.22996899393718107	No Hit
GGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT	707	0.20817935814799876	No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGCGG	652	0.19198435857495783	No Hit
ATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	637	0.18756754050958302	No Hit
TATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	602	0.17726163169037515	No Hit
ACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	590	0.17372817723807532	No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	550	0.16194999573040922	No Hit
TATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	504	0.14840508699659316	No Hit
ACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	463	0.1363324509512354	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	456	0.13427126918739382	No Hit
ATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	376	0.11071490617206156	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCTCG	30	2.2530992E-4	56.665977	7
CCTAGCT	25	0.007791926	50.99938	3
GTCCGTG	25	0.007791926	50.99938	7
GTATCAA	4735	0.0	42.634117	1
CGTCTTA	40	9.3106774E-4	42.499485	1
CAATACC	80	1.1254087E-8	42.499485	4
TGGTATC	1170	0.0	41.773	2
GTGGTAT	1150	0.0	41.02124	1
ACAATAC	95	1.1405064E-9	40.262672	3
GAATCAA	110	1.1277734E-10	38.635895	1
TTACTCC	45	0.0016614957	37.77732	4
TATCAAC	5510	0.0	37.408802	2
GTGTATA	500	0.0	37.399548	1
GCAGGTC	80	5.398251E-7	37.18705	3
TATACGT	105	3.0377123E-9	36.42813	4
AGGTCTC	70	9.229805E-6	36.428127	5
AGCGTCA	60	1.5932808E-4	35.416237	3
AATACCT	60	1.5932808E-4	35.416237	5
CGTGCAA	85	8.6767614E-7	34.999573	8
TGCAGGT	85	8.6767614E-7	34.999573	2