FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005411472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005411472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54118
Sequences flagged as poor quality0
Sequence length91
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGGGG15862.930633061088732No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGGGG15172.8031338926050484No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGCGG13192.4372667134779555No Hit
GTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACCGATCAG5601.0347758601574337No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGCGG5200.9608632987176171No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTTGGGG4350.8037991056580066No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGTTGGCGG3560.6578217968143686No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGTGGGG3190.5894526774825382No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGTTGGGGG3160.5839092353745519No Hit
ATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGGGGGGG2740.5063010458627444No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTTGCGG2580.4767360212868177No Hit
ATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGGGGGGG2330.4305406703869323No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGTGTGGCGG2100.3880409475590377No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGCGGGTGGCGG2030.37510624930706976No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGATGGCGG1980.36586717912709266No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGTGGGGGG1660.3067371299752393No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGTGTGGGGG1550.2864111755792897No Hit
ACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGGGGGGGGG1540.28456336154329426No Hit
GTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACCGATCAGTA1530.2827155475072989No Hit
ACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGGGGGGGGG1440.2660852211833401No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGTTTGGGG1430.26423740714734467No Hit
ATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGCGGGGG1410.26054177907535386No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCTGGGGTGGCGG1240.22912894046343174No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCTGGGGTGGGGG1220.22543331239144093No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGGCG1180.21804205624745926No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGCGGGTGGGGG1180.21804205624745926No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGTTTGCGG1160.21434642817546842No Hit
TTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGGGGG1150.212498614139473No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGTTTGGCGG1120.20695517203148675No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGTGCGG1110.20510735799549132No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGGCG1110.20510735799549132No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGCCG1100.20325954395949591No Hit
GTGTATAAGAGACAGATACACATCTCCGAGCCCACGAGACCGATCAGTAT1080.19956391588750508No Hit
GAGATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACCG1030.190324845707528No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGCCGG990.18293358956354633No Hit
ATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGCGGGGT950.17554233341956466No Hit
GATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACCGAT950.17554233341956466No Hit
TTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGGGGG910.16815107727558298No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGCGGATGGCGG890.16445544920359215No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGCGGTTGGCGG850.15706419305961047No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGTATGGCGG840.15521637902361507No Hit
ACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGCGGGGGGG810.1496729369156288No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCTGGGTTGGCGG800.1478251228796334No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTAGCGGGGGGGGGGG790.14597730884363797No Hit
ATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGGGGGGT770.14228168077164713No Hit
ATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGCGGGGG770.14228168077164713No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTAGCGGGGGTGGGGG760.14043386673565172No Hit
TATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGGGGGG750.1385860526996563No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGTGGGCGG750.1385860526996563No Hit
TATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGGGGGG710.13119479655567465No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGG710.13119479655567465No Hit
GCGTCAGATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAG690.1274991684836838No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATGGGGGGTGGGGG680.12565135444768838No Hit
TTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGCGGG670.12380354041169297No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGCGGGGGGCGG660.12195572637569754No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGTGTTGGGG650.12010791233970214No Hit
TCTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGGGGGG640.1182600983037067No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGATGGGGG630.1164122842677113No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGCGGGGGGGGG630.1164122842677113No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGTGTGGGG620.11456447023171587No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGTGGGGGGG610.11271665619572047No Hit
ATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTTGGGGGGG610.11271665619572047No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATGGGGGGGGGGGG600.11086884215972505No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCTGGGGTTGGGG570.1053254000517388No Hit
ACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGGGTGGCGGGGTGG560.10347758601574338No Hit
GGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAA550.10162977197974796No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)