EGAF00005411475 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411475
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	101508
Sequences flagged as poor quality	0
Sequence length	61
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	9521	9.379556291129763	No Hit
GGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAA	549	0.5408440714032392	No Hit
GATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAAA	199	0.1960436615833235	No Hit
GGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAAAAAAAA	192	0.18914765338692519	No Hit
AGATGGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAA	186	0.18323678921858375	No Hit
ATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	170	0.16747448476967333	No Hit
CCGCGAGATGGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAA	110	0.10836584308625921	No Hit
GGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAAAAAAA	109	0.10738069905820231	No Hit
GAGATGGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAA	106	0.1044252669740316	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTAA	15	0.0057688965	54.999012	48
GGTCGCG	15	0.0057688965	54.999012	19
GGGTCGC	15	0.0057688965	54.999012	18
TAAGTGT	15	0.0057688965	54.999012	55
GCAGCGT	15	0.0057688965	54.999012	46
CGCGTCA	15	0.0057688965	54.999012	22
GCGTCAG	15	0.0057688965	54.999012	23
AGCAGCG	15	0.0057688965	54.999012	45
TCGCGTC	15	0.0057688965	54.999012	21
GCGTAAT	15	0.0057688965	54.999012	49
ACGGGTC	25	7.823257E-4	43.999214	16
GTGTATA	70	1.8189894E-12	43.234806	1
TACCACT	55	1.899025E-8	39.999283	13
GTGGTAT	575	0.0	39.236015	1
TGGTATC	580	0.0	38.423412	2
TGTATAA	80	9.094947E-12	37.830456	2
ACGGGAG	60	4.0885425E-8	36.666008	16
CGGGCCG	30	0.0019175431	36.666008	17
ACCACTG	60	1.697128E-6	32.082756	14
CGGGGAC	70	1.58474E-7	31.428009	17