EGAF00005411582 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411582
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	524593
Sequences flagged as poor quality	0
Sequence length	91
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	1260	0.24018620149334818	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1240	0.23637372210456487	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1177	0.22436441202989746	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1076	0.20511139111654175	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	811	0.154596039215163	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	725	0.13820237784339479	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	643	0.12257121234938324	No Hit
GGTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	607	0.11570874944957328	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	950	0.0	55.941383	1
TGGTATC	985	0.0	55.2327	2
TCGACTT	420	0.0	40.479324	2
ATACGTG	95	1.1423253E-9	40.266273	5
CGTGCAA	65	5.55318E-6	39.233807	8
CGACTTT	450	0.0	38.72522	3
GTATCAA	3990	0.0	38.679466	1
GGTATCA	2040	0.0	38.555676	1
AGCGTCA	85	8.682673E-7	35.002705	3
GCGTCAG	85	8.682673E-7	35.002705	4
GCTCGTC	50	0.0027852517	34.00587	6
TTGCTCG	50	0.002786554	34.002632	4
ACGTGCA	75	1.48136805E-5	34.002632	7
TATACGT	115	7.394192E-9	33.263443	4
GTCTTAC	65	2.5460334E-4	32.704193	1
TATCAAC	4865	0.0	32.58731	2
GTCGACT	555	0.0	32.173855	1
TACGTGC	120	1.1186785E-8	31.880507	6
TAGTACA	55	0.0044441433	30.911482	4
ATCAACG	5410	0.0	29.775871	3