EGAF00005411593 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411593
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	872385
Sequences flagged as poor quality	0
Sequence length	61
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	6790	0.7783260830940467	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGA	1348	0.15451893372765466	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAA	1187	0.13606377918006385	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAAC	1072	0.1228815259317847	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCA	909	0.10419711480596297	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGCA	15	0.005783766	54.99851	15
TCGTACA	25	7.856486E-4	43.99881	25
TGGTATC	1625	0.0	41.479435	2
GTGGTAT	1660	0.0	40.94573	1
TTAACGC	35	8.667387E-5	39.28465	22
CGTACAG	30	0.0019256254	36.665672	26
TCAGTCG	65	8.391726E-8	33.845238	55
GAACCGT	100	3.6379788E-12	33.000996	6
CGACGAG	50	1.8198323E-5	32.999107	24
GTATCAA	9565	0.0	32.22202	1
CGTTAGA	35	0.0040996415	31.42772	50
AGTTAGC	35	0.0040996415	31.42772	42
CAGTACG	35	0.0040996415	31.42772	12
GTAGGCG	45	3.7954067E-4	30.554728	45
ATCGTCA	45	3.7954067E-4	30.554728	10
ACCGTGT	110	1.2732926E-11	29.999186	8
ACGAGTC	55	3.490535E-5	29.999186	26
AGACGTT	65	3.2037751E-6	29.61628	6
GCGAAAT	130	0.0	29.614582	42
TGGTCGT	85	2.7082933E-8	29.116861	51