EGAF00005411623 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411623
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	758117
Sequences flagged as poor quality	0
Sequence length	61
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	12495	1.6481624867929356	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGA	2181	0.2876864652817441	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAA	1615	0.21302780441541347	No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATCGGGATATCATC	1557	0.2053772702630333	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAAC	1539	0.20300296656057046	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGATGCCTTATGTGA	1432	0.18888905010704152	No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTT	1282	0.1691031859198514	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCA	1152	0.15195543695761998	No Hit
AATTAGGGCTGAAAGCCCTAACTTAATGGACGGGAGGTATCCCAATAGGAGGTTTCCTCCT	1014	0.1337524419054051	No Hit
TCCCTACTCATAACCCCAGCACTTAGATATTTTAAAGAGGCATCTATCACATAAGGCATCA	982	0.1295314575454712	No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGAGAG	978	0.12900383450047948	No Hit
GTATCAACGCAGAGTACGGGGTATAAGACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	969	0.12781668264924806	No Hit
GGCTTATATTGAAGTATAAACCAATGAGAGAGCCTCACTTAGTTACAGTTTTATGGATAAT	964	0.12715715384300838	No Hit
GAGTAGGGATGAGCATAAACCAACAACTCTCAAAGAAGATGGGAAGCTATACTATATAGGT	933	0.12306807524432245	No Hit
GACCATAATGTGATCCCTTCCGGCGGTCGGTATAAAATCAGGCAGTTTTTGATCACGTTTA	843	0.11119655673200839	No Hit
GTATAAACCAATGAGAGAGCCTCACTTAGTTACAGTTTTATGGATAATTGGGATATTCTTT	788	0.10394173986337202	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCAGAT	30	5.427373E-7	54.998417	8
CTTAACG	45	3.272362E-9	48.887486	21
GTGGTAT	2270	0.0	44.02386	1
TCTCAAC	25	7.840598E-4	44.01615	2
TACGCAG	50	8.307325E-9	43.998734	22
CTACGCA	45	1.8036553E-7	42.77655	21
CACCAGG	45	1.8036553E-7	42.77655	20
TGGTATC	2335	0.0	42.649487	2
CAGTGGT	140	0.0	41.295116	1
CTGCTTA	210	0.0	40.59407	18
TAACGCA	55	1.9272193E-8	39.998848	23
CGGTCAC	50	4.122994E-7	38.49889	16
ATCGGTC	65	1.9772415E-9	38.075825	14
ACTGCTT	225	0.0	37.8878	17
ACCACTG	305	0.0	37.86776	14
CTTAAAC	165	0.0	36.66561	21
TCGGTCA	60	4.149115E-8	36.66561	15
GCTTAAA	170	0.0	35.587208	20
TGCTTAA	240	0.0	35.519814	19
CGGGAGA	55	8.6966793E-7	34.998993	17