EGAF00005411639 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411639
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1006176
Sequences flagged as poor quality	0
Sequence length	61
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	17705	1.7596325096205834	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGA	1786	0.17750373692077728	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGAGATGTTGGAAC	1476	0.14669401774639823	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAA	1333	0.13248179244982985	No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTT	1317	0.13089161339566835	No Hit
GTATAAAATCAGGCAGTTTTTGATCACGTTTATTGTAAGCCGTCAGCATCGGGATATCATC	1270	0.12622046242406895	No Hit
GTCTTAGCAGTAGTTTATAAGGAATATATCCCATTTTTAGTTATAATGATGCCTTATGTGA	1202	0.11946220144388257	No Hit
TCCCTACTCATAACCCCAGCACTTAGATATTTTAAAGAGGCATCTATCACATAAGGCATCA	1026	0.1019702318481061	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGCACT	15	0.005783733	54.999207	6
TGCTACG	50	8.310963E-9	43.999363	19
GTGGTAT	2740	0.0	42.78037	1
TGGTATC	2885	0.0	40.23272	2
TGCTTAA	155	0.0	37.257526	19
TACTGAA	30	0.0019237672	36.673428	2
GGACTCT	30	0.0019256457	36.666138	6
AGAGTCC	30	0.0019256457	36.666138	11
GTGCTAT	40	1.8948855E-4	34.395016	1
CTGCTTA	180	0.0	32.08287	18
CGGCTTG	55	3.4907614E-5	29.999565	30
AGTACGT	65	3.205534E-6	29.614958	13
CGTCTAC	195	0.0	29.614954	55
CGGGCCG	160	0.0	29.218328	17
GCATCGT	170	0.0	29.117226	8
GTACTAG	190	0.0	28.96422	1
GTATCAA	12095	0.0	28.733133	1
GCTTAAA	165	0.0	28.332924	20
GTACAAG	50	7.0074253E-4	27.51601	1
GAATCGT	40	0.007873231	27.499603	43