EGAF00005411640 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411640
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1725896
Sequences flagged as poor quality	0
Sequence length	91
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3270	0.18946680448879888	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2332	0.1351182226507275	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	2227	0.12903442617631652	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	2215	0.12833913515066958	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	2119	0.12277680694549382	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2107	0.12208151591984685	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	1977	0.11454919647533802	No Hit
GACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAA	1953	0.1131586144240441	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	1844	0.10684305427441747	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1741	0.10087513963761431	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	8695	0.0	44.533127	1
GTGGTAT	1900	0.0	43.399277	1
TGGTATC	1940	0.0	42.93766	2
CGACTTT	885	0.0	42.259415	3
TATCAAC	10115	0.0	39.74745	2
AGCGTCA	280	0.0	37.946003	3
TCGACTT	1025	0.0	36.487396	2
ATCAACG	11620	0.0	34.818886	3
CAACGCA	11885	0.0	33.93525	5
TCAACGC	11975	0.0	33.57374	4
CCGTGTA	90	1.3601402E-6	33.0571	9
CCGCGTA	65	2.553181E-4	32.693836	9
GGTATCA	4175	0.0	32.06922	1
ACGTGCC	135	1.0168151E-9	31.482952	7
GCATCGT	290	0.0	30.7773	8
AACGCAG	13430	0.0	30.412813	6
GTCGACT	1235	0.0	30.28657	1
TATACGT	270	0.0	29.90707	4
TCGAGGG	2965	0.0	29.815895	9
TATATCG	175	1.8189894E-11	29.14253	5