FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005411651

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005411651
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138822
Sequences flagged as poor quality0
Sequence length61
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41072.9584647966460644No Hit
GAATAGAATGGAATGGATTGGAATCAACGCGAGTGCAGGGGAATGGAATGGAATGGAATGC3170.22834997334716398No Hit
CTCCATTACATTCCATTCCATTCGGGTTGTTCCATTCCATTCCATTCCATTCCACTCCATT2950.21250234112748698No Hit
GAATATAATCAATCCGAATGTAATGGAATGGAATGGAACGGAATGGAATTGAATGGAATGG2500.18008672976905676No Hit
GAGTAAGGGAGTTGAATATAATCAATCCGAATGTAATGGAATGGAATGGAACGGAATGGAA2460.17720534209275188No Hit
CCCTTACTCTCCATTACATTCCATTCCATTCGGGTTGTTCCATTCCATTCCATTCCATTCC2420.17432395441644696No Hit
GTAATGGAGAGTAAGGGAGTTGAATATAATCAATCCGAATGTAATGGAATGGAATGGAACG2050.14767111841062655No Hit
CCATTACATTCCATTCCATTCGGGTTGTTCCATTCCATTCCATTCCATTCCACTCCATTCC1910.13758626154355938No Hit
GAATGGAACAACCCGAATGGAATGGAATGTAATGGAGAGTAAGGGAGTTGAATATAATCAA1910.13758626154355938No Hit
GAATGGAATAGAATGGAATGGATTGGAATCAACGCGAGTGCAGGGGAATGGAATGGAATGG1790.12894209851464467No Hit
GTTCCATTCCATTCCATTCCATTCCACTCCATTCCATTGCACTCGGGTTGATTCCATTCCA1740.1253403639192635No Hit
ATTCTATTCCATTCCATTCCCTTCCTTTCCGTTCCATTCCATTCCATTCCATTCCATTCCA1650.11885724164757748No Hit
ATTCCATTCCGTTCCATTCCATTCCATTACATTCGGATTGATTATATTCAACTCCCTTACT1630.11741654780942502No Hit
GAATGGAACGGAACGGAATGGAATGGAATGGAATGGAATGGAATGGAACGGAAAGGAAGGG1620.1166962008903488No Hit
ATTATATTCAACTCCCTTACTCTCCATTACATTCCATTCCATTCGGGTTGTTCCATTCCAT1560.11237411937589142No Hit
GAATGGAATGGAACGGAAAGGAAGGGAATGGAATGGAATAGAATGGAATGGATTGGAATCA1520.10949273169958652No Hit
GAATGGAATGGAATGGAATGGAATGGAATGGAACGGAAAGGAAGGGAATGGAATGGAATAG1510.1087723847805103No Hit
GGATTGGAATCAACGCGAGTGCAGGGGAATGGAATGGAATGGAATGCAATGGAATGGAATA1500.10805203786143405No Hit
GAATGGAATGGATTGGAATCAACGCGAGTGCAGGGGAATGGAATGGAATGGAATGCAATGG1490.10733169094235785No Hit
GTTCCATTCCATTCCATTACATTCGGATTGATTATATTCAACTCCCTTACTCTCCATTACA1470.10589099710420538No Hit
GTAAGGGAGTTGAATATAATCAATCCGAATGTAATGGAATGGAATGGAACGGAATGGAATT1440.10372995634697671No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)