EGAF00005411705 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411705
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	94257
Sequences flagged as poor quality	0
Sequence length	61
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	223	0.23658720307245087	No Hit
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCT	122	0.12943335773470405	No Hit
GTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCTGTTCAATCGT	103	0.10927570366126653	No Hit
GTATTAATCTCTATCTTTCAAAGAGAAAAAAACTTATCTGCGGTTTCCTCAAGCTCCGCCT	97	0.10291012869070731	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCACCC	15	0.005767432	54.99947	43
CTGAGAG	15	0.005767432	54.99947	9
CTAGAGG	25	7.82008E-4	43.999577	4
TGGTATC	100	0.0	43.999577	2
GTGGTAT	120	0.0	38.978634	1
CACAGTT	40	1.8884767E-4	34.374672	43
CTGCCGA	50	1.8025365E-5	32.999683	55
TAGAGGG	35	0.0040809317	31.42827	5
CATAGAA	35	0.0040809317	31.42827	2
GCAGACA	35	0.0040809317	31.42827	34
GGTATCA	185	0.0	28.257961	1
GGCATAC	50	6.984206E-4	27.499735	39
CGGCAGG	55	0.0012182856	24.99976	34
ATACTCA	55	0.0012182856	24.99976	42
TGTGACA	55	0.0012182856	24.99976	10
AGTGCAA	55	0.0012182856	24.99976	36
ACGGCAG	55	0.0012182856	24.99976	33
CATACTC	55	0.0012182856	24.99976	41
TACTCAT	55	0.0012182856	24.99976	43
GTGACAA	55	0.0012182856	24.99976	11