FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005411708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005411708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1269
Sequences flagged as poor quality0
Sequence length91
%GC60

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACTAAGGCG211.6548463356973995No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGTGGGGG191.4972419227738378No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGTGGCGG181.4184397163120568No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGGGGGG131.024428684003152No Hit
GATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACTAAG80.6304176516942475No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGGGCGG70.5516154452324665No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGGTGGCGG60.4728132387706856No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGTTGGCGG60.4728132387706856No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGTTGCGG60.4728132387706856No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGGTTGCGG50.3940110323089046No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGATGGCGG50.3940110323089046No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTGGGGTGGCGG50.3940110323089046No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGTTGGCGG50.3940110323089046No Hit
GTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAA40.31520882584712373No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTGGTTTTGCGG40.31520882584712373No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGGTGGGGG40.31520882584712373No Hit
ATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGGGCGGGGG40.31520882584712373No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTGGTATGGCGG40.31520882584712373No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGTGGGG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTGGGATGGCGG30.2364066193853428No Hit
AGAGACAGCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGATGGCCG30.2364066193853428No Hit
GTGTATAAGAGACAGTCTTATACACATCTCCGAGCCCACGAGACTAAGGC30.2364066193853428No Hit
GAGATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACTA30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGATGGCGG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGGGGGGGG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGTTGGGGG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGTGTGGCGG30.2364066193853428No Hit
GTGTATAAGAGACAGACACATCTCCGAGCCCACGAGACTAAGGCGAATCG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGTTGGGG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGTGGCCG30.2364066193853428No Hit
ACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGTTGGGGGGGGG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGTGTGGCGG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGGTTGGCGG30.2364066193853428No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGTATGCCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGGGCCG20.15760441292356187No Hit
GCCTTAGGCTGTGGCCCAGAAGCTGGAAGTTTGGGAACTGTCTCTTATAC20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGTGGCG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAAGCGGGGGGGGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGGGGGC20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGTTGCCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTGGGTTGGCGG20.15760441292356187No Hit
GTATAAGAGACAGCTCTTATACACATCTCCGAGCCCACGAGACTAAGGCG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTTTGGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTGGGGTTGCGG20.15760441292356187No Hit
ACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGGGGGGGGGGG20.15760441292356187No Hit
GCAGCGTCAGATGTGTATAAGCTGTCTCTTATACACATCTCCGAGCCCAC20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATGGGGGGGGGGGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGGGTGGGGG20.15760441292356187No Hit
ATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGTGGGGGGGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGGCGT20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAAGGGGGGGTTGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGTGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGGGGGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGAGGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGTTGGCCG20.15760441292356187No Hit
GGAGATGTGTATAAGAGACAGCTTATACACATCTCCGAGCCCACGAGACT20.15760441292356187No Hit
ATACATGACCTTATGGGACTTTCCTACTTGACCTGTCTCTTATACACATC20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGTTGCCGT20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGGATGGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGCTGTCTCTTATACACATCTCCGAGCC20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGTTGCCG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGGGTGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATATCGTATGGCGT20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAAGCGCGGGTGGCCG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGTTGGCG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGTATGGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGTTTGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGGATGCGGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGCGTGTGCCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAAGCGGGGGTGGCGG20.15760441292356187No Hit
ATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTGGGGTGGGGGGGT20.15760441292356187No Hit
ATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTGGGGTGGGGGGGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGCATCGGGGGTGGCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGGGGGGCG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGCATGGGGGTGGGCGG20.15760441292356187No Hit
ATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGGTTGGCGGGGT20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTGGTGTGCCGG20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGTTTGGCGT20.15760441292356187No Hit
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCGGGTTTGGCGG20.15760441292356187No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)