EGAF00005411715 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411715
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	140370
Sequences flagged as poor quality	0
Sequence length	61
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1063	0.7572843200113984	No Hit
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	381	0.27142551827313527	No Hit
GTATCAACGCAGAGTACGGGATACCAGCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	275	0.19591080715252546	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	196	0.13963097527961815	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	152	0.10828524613521408	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTCT	15	0.005774112	54.997505	53
AGCTCGT	15	0.005774112	54.997505	38
GTGGTAT	420	0.0	41.30699	1
TGGTATC	445	0.0	40.19536	2
ATAAACG	45	8.770221E-6	36.67807	3
TGCTTAA	40	1.8935809E-4	34.37344	19
CGGGGAA	50	1.8092529E-5	32.998505	17
CCTTGAT	60	1.6941776E-6	32.10475	2
GGTCGTC	35	0.0040884004	31.427149	52
CTGGTCG	35	0.0040884004	31.427149	50
CTACCCC	35	0.0040884004	31.427149	18
GTATCAA	1885	0.0	30.825026	1
TATCAAC	2030	0.0	28.331709	2
AGAGTAC	985	0.0	27.638342	11
GTGTAAG	40	0.007797253	27.537996	1
CCAGAAC	40	0.007838086	27.508554	3
GAGTGCT	40	0.007851735	27.498753	46
CAGCGAG	40	0.007851735	27.498753	17
CCATGGC	40	0.007851735	27.498753	9
CGGGGGA	40	0.007851735	27.498753	6