EGAF00005411724 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411724
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1994194
Sequences flagged as poor quality	0
Sequence length	91
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAA	11423	0.5728128757783847	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	7886	0.39544798550191207	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6868	0.34439979259791176	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAA	5689	0.2852781625057542	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	5494	0.27549977584929053	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5330	0.2672759019433415	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACATCAA	5148	0.25814940773064204	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4768	0.23909409014368713	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAA	3413	0.17114683927441363	No Hit
GGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2789	0.13985600197372974	No Hit
GGTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACATCA	2401	0.12039951980599682	No Hit
CATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2127	0.10665963291435036	No Hit
GAGTACGGGATACCAGCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	2057	0.10314944283254288	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	3950	62.31188	1
TGGTATC	4505	55.287483	2
GTATCAA	15195	39.1387	1
GGTATCA	8165	37.38158	1
GCGTCAG	625	34.682804	4
TATCAAC	18005	33.332325	2
AGCGTCA	670	31.71898	3
ATCAACG	19705	30.67236	3
TCAACGC	20025	30.097315	4
CAACGCA	20270	29.923	5
GATATAC	9410	29.499382	1
ATATACG	9625	29.321852	2
AACGCAG	20950	28.912628	6
CGTCAGA	775	28.519148	5
CGCATTG	9920	28.192802	7
ATACGCA	10010	28.151625	4
TATACGC	10245	27.505884	3
ACGCATT	10200	27.504292	6
TACGCAT	10225	27.477238	5
GCATTGT	10450	26.193504	8