EGAF00005411729 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411729
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1145738
Sequences flagged as poor quality	0
Sequence length	61
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	5304	0.462933061485261	No Hit
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2906	0.25363564794045407	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1632	0.14244094199546495	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCCTGTCTCTTATACACATCTGACGCTGCCG	1285	0.11215478582363508	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACCTGTCTCTTATACACA	1180	0.10299038698201508	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCCTGTCTCTTATACACATCTGA	1170	0.102117587092337	No Hit
GTATCAACGCAGAGTACGGGATACCAGCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	1151	0.10045926730194862	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTAT	20	2.605756E-4	55.03359	1
GTGGTAT	3910	0.0	44.9699	1
TGGTATC	4160	0.0	42.250774	2
AACGATA	45	3.7955574E-4	30.555532	49
GTATCAA	15955	0.0	27.456429	1
CGAATTA	155	0.0	26.611721	15
GACAGGT	380	0.0	25.344412	1
AGAGTAC	8970	0.0	24.463795	11
CGAGGGG	1350	0.0	24.443357	10
TATCAAC	17955	0.0	24.296568	2
CAGAGTA	9235	0.0	24.178677	10
GGTATCA	7975	0.0	24.014654	1
CCCTTGA	450	0.0	23.847885	1
TTAAACG	215	0.0	23.023237	22
GTCCTAC	60	0.0020283144	22.93066	1
GAGGGGT	1260	0.0	22.697405	11
GGTAGAT	390	0.0	21.858957	19
ATCAACG	19980	0.0	21.732965	3
TACGGGC	4370	0.0	21.646635	15
ACGGGCC	4130	0.0	21.506308	16