EGAF00005411753 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411753
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	235132
Sequences flagged as poor quality	0
Sequence length	61
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1221	0.5192827858394433	No Hit
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	638	0.2713369511593488	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	342	0.1454502151982716	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCCTGTCTCTTATACACATCTGACGCTGCCG	314	0.13354201044519673	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCCTGTCTCTTATACACATCTGA	291	0.12376027082659953	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACCTGTCTCTTATACACA	253	0.10759913580456934	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATCGAA	15	0.0057785297	54.998512	11
GTGGTAT	595	0.0	48.117092	1
TGGTATC	630	0.0	45.414913	2
TACGGAG	25	7.8447384E-4	43.998814	5
GGACGTC	30	0.0019227684	36.665676	55
ATTGAGT	30	0.0019227684	36.665676	30
TAGGTGA	40	1.8972636E-4	34.37407	35
AGCCATA	45	3.787056E-4	30.554728	39
GTATCAA	2790	0.0	30.389917	1
TATCAAC	2990	0.0	28.155027	2
GTATAAG	50	6.9727714E-4	27.52853	1
ACGGGTA	100	4.280082E-9	27.499258	16
CGGGCAA	50	7.0162903E-4	27.499258	17
TCGAGAT	50	7.0162903E-4	27.499258	15
TAATTCG	40	0.007861654	27.499254	5
CCGACGA	80	5.151196E-7	27.499254	55
GGTATCA	1210	0.0	27.073511	1
AGAGTAC	1665	0.0	26.756035	11
TACGGGT	115	6.566552E-10	26.303637	15
ACGGGGC	115	6.566552E-10	26.303637	16